MLOC_2724 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5292240.7460350.8531270.647945
LEAShoots from the seedlings (10 cm shoot stage)0.5617510.4405120.4585030.38135
INF1Young developing inflorescences (5mm)1.67491.656731.549461.30268
INF2Developing inflorescences (1-1.5 cm)1.65871.35481.984311.76541
ROORoots from the seedlings (10 cm shoot stage)0.5982990.6798080.6393190.691206
NODDeveloping tillers at six leaf stage, 3rd internode0.5548270.6185790.5539182.21029
CAR5Developing grain, bracts removed (5 DPA)1.361040.820231.183411.01965
CAR15Developing grain, bracts removed (15 DPA)0.454510.5921260.6082871.10708



CDS Structure of MLOC_2724






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2724.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2724.4CUST_10452_PI427708080AvailableAvailablecontig_124340 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g57510.1 +3 0.0 639 318/369 (86%) 13104.m06022 protein exostosin family domain containing protein, expressed
TAIR PP10 AT1G34270.1 +3 2e-163 501 246/370 (66%) Exostosin family protein | chr1:12492571-12494514 REVERSE LENGTH=477