MLOC_27223 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7437572.487141.947630
LEAShoots from the seedlings (10 cm shoot stage)7.803052.315964.926480
INF1Young developing inflorescences (5mm)2.4553106.23660
INF2Developing inflorescences (1-1.5 cm)6.743323.856622.490950
ROORoots from the seedlings (10 cm shoot stage)1.232851.3365700
NODDeveloping tillers at six leaf stage, 3rd internode2.956663.289582.692840
CAR5Developing grain, bracts removed (5 DPA)6.044683.191025.994760
CAR15Developing grain, bracts removed (15 DPA)1.369483.586723.096560



CDS Structure of MLOC_27223






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249100.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249100.1CUST_13935_PI427708083NoneNoneNone
MLOC_27223.1NoneAvailableNonecontig_1815139 (Not mapped)
MLOC_30099.1NoneAvailableNonecontig_2064810 (Mapped)
MLOC_35688.2NoneAvailableNonecontig_251641 (Mapped)
MLOC_46574.2NoneAvailableAvailablecontig_292439 (Not mapped)
MLOC_8251.1NoneAvailableNonecontig_1417169 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----