MLOC_27172 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.325156.663037.036217.26212
LEAShoots from the seedlings (10 cm shoot stage)18.289237.385744.571425.9611
INF1Young developing inflorescences (5mm)9.285619.3734514.04059.89038
INF2Developing inflorescences (1-1.5 cm)9.9735611.272312.023713.3411
ROORoots from the seedlings (10 cm shoot stage)7.612036.7577711.73198.48548
NODDeveloping tillers at six leaf stage, 3rd internode26.05316.013246.405358.7665
CAR5Developing grain, bracts removed (5 DPA)4.608038.286474.615986.63366
CAR15Developing grain, bracts removed (15 DPA)2.988214.322592.750049.40452



CDS Structure of MLOC_27172






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27172.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_27172.1CUST_2971_PI427708100AvailableAvailablecontig_181138 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----