MLOC_27171 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.12853000.136354
INF1Young developing inflorescences (5mm)00.070702900.0550488
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)1.186540.4492140.3251851.66497



CDS Structure of MLOC_27171






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27171.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_27171.1CUST_10442_PI427708080AvailableAvailablecontig_181127 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g28820.1 -2 6e-14 74 45/110 (41%) 13104.m02732 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----