MLOC_27161 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1920480.3343810.5363470
LEAShoots from the seedlings (10 cm shoot stage)1.2827800.5009670
INF1Young developing inflorescences (5mm)0.8926731.242251.133880
INF2Developing inflorescences (1-1.5 cm)0.9277031.471331.636810
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.3606820.2279030
CAR5Developing grain, bracts removed (5 DPA)0.1632940.14553900
CAR15Developing grain, bracts removed (15 DPA)0.19326500.2872990



CDS Structure of MLOC_27161






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK357617
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357617CUST_13648_PI427708083NoneNoneNone
MLOC_1559.2NoneAvailableAvailablecontig_113740 (Mapped)
MLOC_27161.1NoneAvailableNonecontig_181068 (Mapped)
MLOC_46275.2NoneAvailableNonecontig_287886 (Not mapped)
MLOC_49306.1NoneAvailableNonecontig_339312 (Not mapped)
MLOC_52417.1NoneAvailableNonecontig_375175 (Mapped)
MLOC_52953.1NoneAvailableNonecontig_379334 (Mapped)
MLOC_69541.2NoneAvailableNonecontig_56586 (Mapped)
MLOC_81547.1NoneAvailableNonecontig_969141 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----