MLOC_27157 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.094082.667393.507812.82116
LEAShoots from the seedlings (10 cm shoot stage)2.841431.347422.813382.4851
INF1Young developing inflorescences (5mm)3.884534.408567.686325.02911
INF2Developing inflorescences (1-1.5 cm)5.538937.404417.344039.87129
ROORoots from the seedlings (10 cm shoot stage)3.456821.591753.003582.68149
NODDeveloping tillers at six leaf stage, 3rd internode3.317453.741873.7500713.619
CAR5Developing grain, bracts removed (5 DPA)5.538033.360384.405545.40105
CAR15Developing grain, bracts removed (15 DPA)1.955631.868993.526327.32197



CDS Structure of MLOC_27157






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK251514.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251514.1CUST_13968_PI427708083NoneNoneNone
MLOC_27157.1NoneAvailableAvailablecontig_18102 (Not mapped)
MLOC_28430.1NoneAvailableNonecontig_19176 (Mapped)
MLOC_29636.1NoneAvailableNonecontig_2023121 (Not mapped)
MLOC_35909.1NoneAvailableNonecontig_252567 (Mapped)
MLOC_3605.1NoneAvailableNonecontig_131992 (Mapped)
MLOC_3606.1NoneAvailableNonecontig_131992 (Mapped)
MLOC_62098.1NoneAvailableNonecontig_461904 (Not mapped)
MLOC_69699.1NoneAvailableNonecontig_568345 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----