- Predicted Gene MLOC_27071
MLOC_27071 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_27071_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_27071_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0.140014 | 0.431219 | 0.197336 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.25808 | 0.263681 | 0.439404 | 0.286219 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.139622 | 0.176123 | 0.23102 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.22425 | 0.525105 | 0.592651 | 0.719326 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.807607 | 0 | 0 | 0.284821 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.38022 | 0.306554 | 0.209246 | 1.80184 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.274039 | 0.743452 | 0.3052 | 0.500808 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.305914 | 0 | 0.446739 | 0.691763 |
CDS Structure of MLOC_27071
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27071.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g05880.1 |
-2 |
5e-20 |
85 |
40/46 (87%) |
13106.m00583 protein profilin domain containing protein, expressed |
TAIR PP10 |
AT2G19770.1 |
-2 |
3e-18 |
79 |
36/46 (78%) |
| Symbols: PRF5 | profilin 5 | chr2:8519885-8521119 REVERSE LENGTH=134 |