MLOC_27053 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.356720.7910831.138770
LEAShoots from the seedlings (10 cm shoot stage)0.332930.7243132.619320
INF1Young developing inflorescences (5mm)1.390831.478262.398340
INF2Developing inflorescences (1-1.5 cm)2.587124.335853.129950
ROORoots from the seedlings (10 cm shoot stage)1.981180.89399700
NODDeveloping tillers at six leaf stage, 3rd internode1.210341.010692.01720
CAR5Developing grain, bracts removed (5 DPA)1.037892.086022.990960
CAR15Developing grain, bracts removed (15 DPA)0.537230.578860.7916330



CDS Structure of MLOC_27053






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK371664
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371664CUST_22177_PI427708080NoneNoneNone
MLOC_27053.1NoneAvailableNonecontig_1801356 (Not mapped)
MLOC_5130.1NoneAvailableNonecontig_13591 (Mapped)
MLOC_54357.1NoneAvailableNonecontig_390708 (Not mapped)
MLOC_8595.1NoneAvailableAvailablecontig_144564 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----