MLOC_27017 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.185552.774260
LEAShoots from the seedlings (10 cm shoot stage)1.074922.265650.9285120
INF1Young developing inflorescences (5mm)1.770490.5962335.972180
INF2Developing inflorescences (1-1.5 cm)3.930513.769144.239940
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.1469010.7892920
CAR5Developing grain, bracts removed (5 DPA)0.5827422.073742.625610
CAR15Developing grain, bracts removed (15 DPA)2.050510.706061.008950



CDS Structure of MLOC_27017






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372981
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372981CUST_25700_PI427708080NoneNoneNone
MLOC_27017.2NoneAvailableNonecontig_179813 (Mapped)
MLOC_30834.2NoneAvailableNonecontig_2131226 (Not mapped)
MLOC_35437.1NoneAvailableNonecontig_248500 (Mapped)
MLOC_41464.1NoneAvailableNonecontig_2589432 (Mapped)
MLOC_46635.1NoneAvailableAvailablecontig_293496 (Not mapped)
MLOC_67335.1NoneAvailableNonecontig_52913 (Mapped)
MLOC_72408.1NoneAvailableNonecontig_615881 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----