MLOC_27011 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.656953.993753.56760
LEAShoots from the seedlings (10 cm shoot stage)3.417124.077425.298260
INF1Young developing inflorescences (5mm)8.789768.5468310.47180
INF2Developing inflorescences (1-1.5 cm)10.522112.203910.77620
ROORoots from the seedlings (10 cm shoot stage)4.097444.602554.179420
NODDeveloping tillers at six leaf stage, 3rd internode2.829342.966455.125450
CAR5Developing grain, bracts removed (5 DPA)6.432596.480936.486330
CAR15Developing grain, bracts removed (15 DPA)3.096782.573652.421710



CDS Structure of MLOC_27011






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK371193
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371193NoneNoneNoneNone
MLOC_27011.1NoneAvailableNonecontig_179786 (Mapped)
MLOC_31316.1NoneAvailableNonecontig_217822 (Mapped)
MLOC_3360.3NoneAvailableAvailablecontig_130172 (Not mapped)
MLOC_46113.1NoneAvailableNonecontig_285637 (Mapped)
MLOC_81574.1NoneAvailableNonecontig_969827 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----