MLOC_26994 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.68553.442063.009562.10347
LEAShoots from the seedlings (10 cm shoot stage)2.979051.499951.41751.44678
INF1Young developing inflorescences (5mm)7.258217.043376.702394.58265
INF2Developing inflorescences (1-1.5 cm)10.18427.7526811.6198.09497
ROORoots from the seedlings (10 cm shoot stage)0.970572.38664.840692.01792
NODDeveloping tillers at six leaf stage, 3rd internode4.606571.280692.460573.98105
CAR5Developing grain, bracts removed (5 DPA)4.898875.871263.542813.53487
CAR15Developing grain, bracts removed (15 DPA)2.6811.182811.755313.66697



CDS Structure of MLOC_26994






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26994.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26994.1NoneAvailableAvailablecontig_179613 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g34050.1 -2 3e-22 96 42/54 (78%) 13108.m03558 protein phosphofructokinase, putative
TAIR PP10 AT2G22480.1 -2 2e-14 76 34/54 (63%) | Symbols: PFK5 | phosphofructokinase 5 | chr2:9545670-9548414 FORWARD LENGTH=537