- Predicted Gene MLOC_26994
MLOC_26994 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.6855 | 3.44206 | 3.00956 | 2.10347 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.97905 | 1.49995 | 1.4175 | 1.44678 |
INF1 | Young developing inflorescences (5mm) | 7.25821 | 7.04337 | 6.70239 | 4.58265 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.1842 | 7.75268 | 11.619 | 8.09497 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.97057 | 2.3866 | 4.84069 | 2.01792 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.60657 | 1.28069 | 2.46057 | 3.98105 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.89887 | 5.87126 | 3.54281 | 3.53487 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.681 | 1.18281 | 1.75531 | 3.66697 |
CDS Structure of MLOC_26994
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_26994.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g34050.1 |
-2 |
3e-22 |
96 |
42/54 (78%) |
13108.m03558 protein phosphofructokinase, putative |
TAIR PP10 |
AT2G22480.1 |
-2 |
2e-14 |
76 |
34/54 (63%) |
| Symbols: PFK5 | phosphofructokinase 5 | chr2:9545670-9548414 FORWARD LENGTH=537 |