- Predicted Gene MLOC_26988
MLOC_26988 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.00256 | 3.00756 | 3.86957 | 2.25644 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.63312 | 2.96 | 3.06975 | 2.02001 |
| INF1 | Young developing inflorescences (5mm) | 3.76605 | 5.01404 | 6.17272 | 2.89567 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.30748 | 5.67877 | 7.24469 | 6.21735 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.81637 | 2.50797 | 2.61016 | 1.87901 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.57746 | 6.12511 | 6.82729 | 14.391 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.907 | 6.32211 | 5.15993 | 4.0516 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.47871 | 2.49811 | 2.65197 | 4.58088 |
CDS Structure of MLOC_26988
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_26988.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g55210.1 |
-3 |
1e-20 |
72 |
30/39 (77%) |
13104.m05721 protein chloride channel protein, putative, expressed |
| TAIR PP10 |
AT5G33280.1 |
-3 |
7e-11 |
49 |
18/40 (45%) |
Voltage-gated chloride channel family protein | chr5:12549280-12552305 FORWARD LENGTH=765 |