MLOC_26912 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.09735920.08158810.07278670.0940804
LEAShoots from the seedlings (10 cm shoot stage)0.9785350.1002430.7075510.497806
INF1Young developing inflorescences (5mm)00.02489870.02707990.0531977
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.5430750.3692070.6638960.518915
NODDeveloping tillers at six leaf stage, 3rd internode4.351536.89750.96181116.0388
CAR5Developing grain, bracts removed (5 DPA)3.533712.941792.573073.26073
CAR15Developing grain, bracts removed (15 DPA)2.820493.083082.588337.78649



CDS Structure of MLOC_26912






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26912.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375353NoneNoneNoneNone
MLOC_26912.5CUST_2077_PI427708080AvailableAvailablecontig_178945 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g21630.1 +1 0.0 612 289/366 (79%) 13101.m02300 protein pectinacetylesterase domain containing protein, expressed
TAIR PP10 AT2G46930.1 +1 1e-166 483 221/365 (61%) Pectinacetylesterase family protein | chr2:19283625-19286090 FORWARD LENGTH=416