MLOC_26885 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.774428.934548.046130
LEAShoots from the seedlings (10 cm shoot stage)5.725112.874935.828990
INF1Young developing inflorescences (5mm)13.97037.450769.628250
INF2Developing inflorescences (1-1.5 cm)8.290477.040615.852740
ROORoots from the seedlings (10 cm shoot stage)7.263364.201995.465390
NODDeveloping tillers at six leaf stage, 3rd internode0.5579640.7156061.479060
CAR5Developing grain, bracts removed (5 DPA)8.967578.688210.86940
CAR15Developing grain, bracts removed (15 DPA)1.236642.244310.4634580



CDS Structure of MLOC_26885






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248623.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248623.1CUST_18582_PI427708080NoneNoneNone
MLOC_26885.1NoneAvailableNonecontig_1787358 (Not mapped)
MLOC_28079.1NoneAvailableNonecontig_1889095 (Mapped)
MLOC_39522.1NoneAvailableNonecontig_2553743 (Mapped)
MLOC_69162.1NoneAvailableAvailablecontig_5601 (Mapped)
MLOC_7313.1NoneAvailableNonecontig_1389905 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----