- Predicted Gene MLOC_26813
MLOC_26813 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 13.8943 | 10.3863 | 8.66442 | 10.7064 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.27968 | 9.13941 | 11.8699 | 8.4184 |
INF1 | Young developing inflorescences (5mm) | 13.2319 | 16.1543 | 17.6715 | 13.0774 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.6189 | 16.3582 | 13.8029 | 16.0511 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.3391 | 11.7438 | 12.564 | 14.392 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.0276 | 14.7854 | 19.124 | 50.8393 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.2163 | 14.0053 | 13.6067 | 12.8879 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.90082 | 5.57412 | 5.44564 | 13.6486 |
CDS Structure of MLOC_26813
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_26813.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g37470.1 |
+1 |
5e-124 |
370 |
215/282 (76%) |
13102.m04102 protein tetratricopeptide repeat containing protein, putative, expressed |
TAIR PP10 |
AT3G14110.2 |
+1 |
1e-73 |
236 |
141/217 (65%) |
| Symbols: FLU | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:4676222-4677010 REVERSE LENGTH=232 |