MLOC_26813 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.894310.38638.6644210.7064
LEAShoots from the seedlings (10 cm shoot stage)9.279689.1394111.86998.4184
INF1Young developing inflorescences (5mm)13.231916.154317.671513.0774
INF2Developing inflorescences (1-1.5 cm)12.618916.358213.802916.0511
ROORoots from the seedlings (10 cm shoot stage)15.339111.743812.56414.392
NODDeveloping tillers at six leaf stage, 3rd internode13.027614.785419.12450.8393
CAR5Developing grain, bracts removed (5 DPA)11.216314.005313.606712.8879
CAR15Developing grain, bracts removed (15 DPA)5.900825.574125.4456413.6486



CDS Structure of MLOC_26813






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26813.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367584NoneNoneNoneNone
MLOC_26813.1CUST_2075_PI427708080AvailableAvailablecontig_178146 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g37470.1 +1 5e-124 370 215/282 (76%) 13102.m04102 protein tetratricopeptide repeat containing protein, putative, expressed
TAIR PP10 AT3G14110.2 +1 1e-73 236 141/217 (65%) | Symbols: FLU | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:4676222-4677010 REVERSE LENGTH=232