MLOC_26766 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6752910.1873110.5372620.436089
LEAShoots from the seedlings (10 cm shoot stage)35.82371.958752.7769211.8534
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)1.238771.276951.230261.41927
ROORoots from the seedlings (10 cm shoot stage)80.338122.48498.434535.174
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.2001960.7302231.627020.865702
CAR15Developing grain, bracts removed (15 DPA)47.765849.839247.3431114.801



CDS Structure of MLOC_26766






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26766.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26766.1CUST_10407_PI427708080AvailableAvailablecontig_1777983 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g04360.1 -3 3e-25 99 50/64 (78%) 13101.m00395 protein hsp20/alpha crystallin family protein, putative, expressed
TAIR PP10 AT5G59720.1 -3 9e-18 78 40/62 (65%) | Symbols: HSP18.2 | heat shock protein 18.2 | chr5:24062632-24063117 FORWARD LENGTH=161