MLOC_26737 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.095280.9460120.2921790.837063
LEAShoots from the seedlings (10 cm shoot stage)1.367691.053320.589881.00402
INF1Young developing inflorescences (5mm)2.12281.561612.548241.62901
INF2Developing inflorescences (1-1.5 cm)3.686024.781413.439084.1061
ROORoots from the seedlings (10 cm shoot stage)2.275261.451211.305951.70195
NODDeveloping tillers at six leaf stage, 3rd internode0.5018071.500162.028854.57691
CAR5Developing grain, bracts removed (5 DPA)1.366472.801331.472111.69077
CAR15Developing grain, bracts removed (15 DPA)0.9534630.5991521.128441.74515



CDS Structure of MLOC_26737






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26737.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26737.1CUST_3857_PI427708083AvailableAvailablecontig_177617 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g10050.1 +3 3e-38 78 37/46 (80%) 13102.m01109 protein expressed protein
TAIR PP10 AT2G22370.1 +3 1e-31 74 35/50 (70%) unknown protein; Has 127 Blast hits to 127 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:9501019-9502078 REVERSE LENGTH=219