- Predicted Gene MLOC_26628
MLOC_26628 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_26628_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_26628_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 31.0307 | 35.258 | 36.0807 | 34.4073 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 23.9418 | 14.478 | 16.0757 | 16.5243 |
INF1 | Young developing inflorescences (5mm) | 82.147 | 84.0186 | 78.2566 | 66.2717 |
INF2 | Developing inflorescences (1-1.5 cm) | 68.7218 | 72.268 | 65.6948 | 74.1585 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.4738 | 28.2884 | 29.5701 | 34.0574 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.51818 | 3.72884 | 8.01123 | 16.2362 |
CAR5 | Developing grain, bracts removed (5 DPA) | 36.2249 | 39.1545 | 41.2306 | 36.8907 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.4056 | 9.16899 | 9.59067 | 20.8216 |
CDS Structure of MLOC_26628
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_26628.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g08170.1 |
+3 |
0.0 |
632 |
344/368 (93%) |
13107.m00806 protein ruvB-like, putative, expressed |
TAIR PP10 |
AT5G22330.1 |
+3 |
0.0 |
597 |
320/368 (87%) |
| Symbols: ATTIP49A, RIN1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7391026-7394071 REVERSE LENGTH=458 |