MLOC_26628 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.030735.25836.080734.4073
LEAShoots from the seedlings (10 cm shoot stage)23.941814.47816.075716.5243
INF1Young developing inflorescences (5mm)82.14784.018678.256666.2717
INF2Developing inflorescences (1-1.5 cm)68.721872.26865.694874.1585
ROORoots from the seedlings (10 cm shoot stage)16.473828.288429.570134.0574
NODDeveloping tillers at six leaf stage, 3rd internode3.518183.728848.0112316.2362
CAR5Developing grain, bracts removed (5 DPA)36.224939.154541.230636.8907
CAR15Developing grain, bracts removed (15 DPA)10.40569.168999.5906720.8216



CDS Structure of MLOC_26628






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26628.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366704NoneNoneNoneNone
MLOC_26628.1CUST_2073_PI427708080AvailableAvailablecontig_176845 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g08170.1 +3 0.0 632 344/368 (93%) 13107.m00806 protein ruvB-like, putative, expressed
TAIR PP10 AT5G22330.1 +3 0.0 597 320/368 (87%) | Symbols: ATTIP49A, RIN1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7391026-7394071 REVERSE LENGTH=458