MLOC_26626 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.200815.882765.146655.95396
LEAShoots from the seedlings (10 cm shoot stage)6.497319.111786.112696.18406
INF1Young developing inflorescences (5mm)6.952798.718039.17397.96755
INF2Developing inflorescences (1-1.5 cm)17.21479.717711.489715.3441
ROORoots from the seedlings (10 cm shoot stage)3.957284.910124.873696.2117
NODDeveloping tillers at six leaf stage, 3rd internode4.324253.286983.900449.47775
CAR5Developing grain, bracts removed (5 DPA)6.772428.367775.919158.18953
CAR15Developing grain, bracts removed (15 DPA)4.552243.978865.5404811.7278



CDS Structure of MLOC_26626






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26626.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26626.1CUST_3848_PI427708083AvailableAvailablecontig_176831 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01700.1 -1 1e-11 53 24/26 (92%) 13106.m00081 protein CWC15 homolog A, putative, expressed
TAIR PP10 AT3G13200.1 -1 5e-11 50 22/26 (85%) | Symbols: EMB2769 | Cwf15 / Cwc15 cell cycle control family protein | chr3:4242239-4243976 FORWARD LENGTH=230