MLOC_26577 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.06890920.1909450.0865230.156944
LEAShoots from the seedlings (10 cm shoot stage)0.1010180.575650.1054340.24653
INF1Young developing inflorescences (5mm)0.1564220.1138060.06404680.105974
INF2Developing inflorescences (1-1.5 cm)0.4250160.2474370.06774270.306829
ROORoots from the seedlings (10 cm shoot stage)0.3861730.43625500.727578
NODDeveloping tillers at six leaf stage, 3rd internode0.0855513000.00823343
CAR5Developing grain, bracts removed (5 DPA)36.508837.71133.802636.2293
CAR15Developing grain, bracts removed (15 DPA)2153.72445.12074.395667.58



CDS Structure of MLOC_26577






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26577.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251572.1NoneNoneNoneNone
MLOC_26577.1CUST_2072_PI427708080AvailableAvailablecontig_1764906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g11650.1 -3 3e-36 130 67/129 (52%) 13107.m01202 protein LTPL164 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10None-----