- Predicted Gene MLOC_26547
MLOC_26547 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.50335 | 10.4158 | 6.61475 | 8.03507 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 116.522 | 341.012 | 305.131 | 188.504 |
| INF1 | Young developing inflorescences (5mm) | 24.2603 | 6.4244 | 3.12391 | 9.78713 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0832856 | 0 | 1.07769 | 0.429445 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 23.6293 | 16.693 | 30.0874 | 20.4475 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 133.579 | 26.8931 | 36.5605 | 80.9469 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.83046 | 0.652519 | 0.333954 | 0.878878 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.43595 | 0.996685 | 0.453631 | 2.4002 |
CDS Structure of MLOC_26547
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_26547.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g05680.1 |
-1 |
8e-35 |
128 |
65/77 (84%) |
13105.m00599 protein 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed |
| TAIR PP10 |
AT1G77330.1 |
-1 |
1e-24 |
100 |
47/76 (62%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:29063215-29064447 REVERSE LENGTH=307 |