MLOC_26534 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.137918.297717.629121.9521
LEAShoots from the seedlings (10 cm shoot stage)2.130090.5657660.2117660.855936
INF1Young developing inflorescences (5mm)5.762876.654763.970225.12872
INF2Developing inflorescences (1-1.5 cm)1.273372.871572.486032.66093
ROORoots from the seedlings (10 cm shoot stage)101.17561.347116.24291.1111
NODDeveloping tillers at six leaf stage, 3rd internode0.09081310.04083590.05764040.142848
CAR5Developing grain, bracts removed (5 DPA)12.457111.37487.623211.045
CAR15Developing grain, bracts removed (15 DPA)21.866819.338719.295351.1342



CDS Structure of MLOC_26534






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26534.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375095NoneNoneNoneNone
MLOC_26534.1CUST_2070_PI427708080AvailableAvailablecontig_176268 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g54240.1 -3 3e-30 111 69/90 (77%) 13104.m05607 protein wound induced protein, putative, expressed
TAIR PP10 AT4G10270.1 -3 1e-18 80 54/94 (57%) Wound-responsive family protein | chr4:6374805-6375077 FORWARD LENGTH=90