- Predicted Gene MLOC_26534
MLOC_26534 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_26534_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 28.1379 | 18.2977 | 17.6291 | 21.9521 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.13009 | 0.565766 | 0.211766 | 0.855936 |
INF1 | Young developing inflorescences (5mm) | 5.76287 | 6.65476 | 3.97022 | 5.12872 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.27337 | 2.87157 | 2.48603 | 2.66093 |
ROO | Roots from the seedlings (10 cm shoot stage) | 101.175 | 61.347 | 116.242 | 91.1111 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0908131 | 0.0408359 | 0.0576404 | 0.142848 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.4571 | 11.3748 | 7.6232 | 11.045 |
CAR15 | Developing grain, bracts removed (15 DPA) | 21.8668 | 19.3387 | 19.2953 | 51.1342 |
CDS Structure of MLOC_26534
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_26534.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g54240.1 |
-3 |
3e-30 |
111 |
69/90 (77%) |
13104.m05607 protein wound induced protein, putative, expressed |
TAIR PP10 |
AT4G10270.1 |
-3 |
1e-18 |
80 |
54/94 (57%) |
Wound-responsive family protein | chr4:6374805-6375077 FORWARD LENGTH=90 |