MLOC_26533 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.580337.72430.280134.4499
LEAShoots from the seedlings (10 cm shoot stage)1.624689.557204.88458
INF1Young developing inflorescences (5mm)27.080345.280718.997429.8002
INF2Developing inflorescences (1-1.5 cm)11.39249.146448.2019211.8428
ROORoots from the seedlings (10 cm shoot stage)119.77182.4678143.092122.5
NODDeveloping tillers at six leaf stage, 3rd internode0.944311000.120587
CAR5Developing grain, bracts removed (5 DPA)20.369422.389716.618121.667
CAR15Developing grain, bracts removed (15 DPA)25.915227.870624.1668.2874



CDS Structure of MLOC_26533






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26533.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26533.1CUST_3840_PI427708083AvailableAvailablecontig_176268 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g54300.1 -2 6e-13 62 29/31 (94%) 13104.m05612 protein wound induced protein, putative, expressed
TAIR PP10None-----