MLOC_26505 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.671749.590649.74151.0151
LEAShoots from the seedlings (10 cm shoot stage)102.35847.686452.726963.418
INF1Young developing inflorescences (5mm)47.461154.946648.872745.7098
INF2Developing inflorescences (1-1.5 cm)63.252271.665569.519380.7925
ROORoots from the seedlings (10 cm shoot stage)95.432558.223248.790287.5807
NODDeveloping tillers at six leaf stage, 3rd internode10.995216.86627.842958.1764
CAR5Developing grain, bracts removed (5 DPA)116.31190.424276.993799.1785
CAR15Developing grain, bracts removed (15 DPA)61.053664.087455.4148148.044



CDS Structure of MLOC_26505






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26505.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248366.1NoneNoneNoneNone
MLOC_26505.2CUST_2069_PI427708080AvailableAvailablecontig_176121 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08560.2 -3 0.0 1304 676/842 (80%) 13101.m00897 protein DnaK family protein, putative, expressed
TAIR PP10 AT1G79930.1 -3 0.0 1145 593/847 (70%) | Symbols: HSP91 | heat shock protein 91 | chr1:30063781-30067067 REVERSE LENGTH=831