- Predicted Gene MLOC_26493
MLOC_26493 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.635863 | 0.302936 | 0.369597 | 0.378892 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.440756 | 0 | 0.261053 | 0.24261 |
| INF1 | Young developing inflorescences (5mm) | 0.122096 | 0.12113 | 0.522938 | 0.165485 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.14572 | 0.176113 | 0.130224 | 0.155049 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.215203 | 0.189042 | 0 | 0.320162 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.109061 | 0.313422 | 0.609317 | 1.09921 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.057347 | 0.104373 | 0.0648345 | 0.0663887 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.132316 | 0.0673042 | 0.292774 | 0.303589 |
CDS Structure of MLOC_26493
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_26493.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g67850.1 |
+3 |
7e-35 |
131 |
69/92 (75%) |
13101.m07379 protein zinc finger, RING-type, putative, expressed |
| TAIR PP10 |
AT1G24440.1 |
+3 |
1e-17 |
82 |
45/92 (49%) |
RING/U-box superfamily protein | chr1:8662340-8663777 FORWARD LENGTH=251 |