MLOC_26475 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.60465.361036.341863.80362
LEAShoots from the seedlings (10 cm shoot stage)7.728244.272284.999334.01828
INF1Young developing inflorescences (5mm)12.122213.964517.0238.58092
INF2Developing inflorescences (1-1.5 cm)22.814924.04921.900419.6317
ROORoots from the seedlings (10 cm shoot stage)2.318084.158234.317543.29824
NODDeveloping tillers at six leaf stage, 3rd internode4.750295.736914.0468513.0685
CAR5Developing grain, bracts removed (5 DPA)13.539315.072713.55210.2072
CAR15Developing grain, bracts removed (15 DPA)6.341554.784856.5923310.0121



CDS Structure of MLOC_26475






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26475.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26475.1CUST_3832_PI427708083AvailableAvailablecontig_175850 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g07110.3 +2 8e-59 204 94/116 (81%) 13103.m00785 protein calmodulin-binding protein, putative, expressed
TAIR PP10 AT3G58480.1 +2 3e-41 160 74/113 (65%) calmodulin-binding family protein | chr3:21629341-21631853 FORWARD LENGTH=575