MLOC_26453 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.907467.264145.673375.80337
LEAShoots from the seedlings (10 cm shoot stage)7.270172.96722.990213.82539
INF1Young developing inflorescences (5mm)21.761421.955621.816616.3769
INF2Developing inflorescences (1-1.5 cm)16.804919.258114.549117.5768
ROORoots from the seedlings (10 cm shoot stage)0.9461583.634773.935943.66201
NODDeveloping tillers at six leaf stage, 3rd internode0.0327490.01876440.2453230.177253
CAR5Developing grain, bracts removed (5 DPA)8.430077.960398.532397.31068
CAR15Developing grain, bracts removed (15 DPA)0.9274930.8145870.6295011.71449



CDS Structure of MLOC_26453






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26453.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26453.1NoneAvailableAvailablecontig_175680 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16290.2 +3 5e-97 312 174/182 (96%) 13101.m01819 protein DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed
TAIR PP10 AT3G10270.1 +3 5e-92 302 165/182 (91%) | Symbols: GYRB1 | DNA GYRASE B1 | chr3:3173805-3179756 REVERSE LENGTH=772