- Predicted Gene MLOC_26453
MLOC_26453 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.90746 | 7.26414 | 5.67337 | 5.80337 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.27017 | 2.9672 | 2.99021 | 3.82539 |
INF1 | Young developing inflorescences (5mm) | 21.7614 | 21.9556 | 21.8166 | 16.3769 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.8049 | 19.2581 | 14.5491 | 17.5768 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.946158 | 3.63477 | 3.93594 | 3.66201 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.032749 | 0.0187644 | 0.245323 | 0.177253 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.43007 | 7.96039 | 8.53239 | 7.31068 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.927493 | 0.814587 | 0.629501 | 1.71449 |
CDS Structure of MLOC_26453
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_26453.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g16290.2 |
+3 |
5e-97 |
312 |
174/182 (96%) |
13101.m01819 protein DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed |
TAIR PP10 |
AT3G10270.1 |
+3 |
5e-92 |
302 |
165/182 (91%) |
| Symbols: GYRB1 | DNA GYRASE B1 | chr3:3173805-3179756 REVERSE LENGTH=772 |