MLOC_2643 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1621.061065.031125.931250.68
LEAShoots from the seedlings (10 cm shoot stage)34.3342397.1753.92205114.922
INF1Young developing inflorescences (5mm)477.727722.035847.655584.604
INF2Developing inflorescences (1-1.5 cm)180.837148.125147.356178.952
ROORoots from the seedlings (10 cm shoot stage)459.499566.199567.998662.591
NODDeveloping tillers at six leaf stage, 3rd internode16.68710.1690770.110591.20258
CAR5Developing grain, bracts removed (5 DPA)4.049381.997621.49752.46321
CAR15Developing grain, bracts removed (15 DPA)43.375539.172238.949294.2885



CDS Structure of MLOC_2643






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2643.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249162.1NoneNoneNoneNone
MLOC_2643.1CUST_105_PI427708080AvailableAvailablecontig_12359 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g36210.1 +1 2e-27 102 50/59 (85%) 13112.m03712 protein inhibitor I family protein, putative, expressed
TAIR PP10None-----