MLOC_26395 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5549420.4138880.3675290.496935
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.12535800.1567
INF2Developing inflorescences (1-1.5 cm)00.056587300.104958
ROORoots from the seedlings (10 cm shoot stage)34.598226.553229.9835.1892
NODDeveloping tillers at six leaf stage, 3rd internode00.049861300.372828
CAR5Developing grain, bracts removed (5 DPA)0.07198570.2674380.2837570.243981
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_26395






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26395.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26395.1CUST_3816_PI427708083AvailableAvailablecontig_175321 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g40700.1 -1 2e-83 254 122/178 (69%) 13110.m03773 protein expansin precursor, putative, expressed
TAIR PP10 AT1G65680.1 -1 1e-46 158 86/178 (48%) | Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | expansin B2 | chr1:24427266-24428399 FORWARD LENGTH=273