- Predicted Gene MLOC_26386
MLOC_26386 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 20.5724 | 20.6749 | 21.1393 | 16.8011 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.9276 | 17.7711 | 16.3694 | 12.1578 |
| INF1 | Young developing inflorescences (5mm) | 20.1801 | 20.9803 | 25.7293 | 14.0485 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.1026 | 26.5249 | 24.6687 | 24.0816 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.5859 | 21.6343 | 22.5388 | 20.8792 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 35.9692 | 31.9741 | 31.235 | 96.3404 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 19.7356 | 22.5961 | 24.0774 | 18.0136 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.16224 | 7.98921 | 9.75475 | 14.8029 |
CDS Structure of MLOC_26386
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_26386.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g46932.2 |
-1 |
4e-68 |
214 |
104/121 (86%) |
13101.m04830 protein vacuolar protein-sorting-associated protein 25, putative, expressed |
| TAIR PP10 |
AT4G19003.1 |
-1 |
5e-55 |
181 |
83/120 (69%) |
| Symbols: VPS25 | E2F/DP family winged-helix DNA-binding domain | chr4:10407571-10408582 REVERSE LENGTH=179 |