MLOC_26365 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3974341.139790.7565590.781859
LEAShoots from the seedlings (10 cm shoot stage)0.174240.2441030.1777960.157358
INF1Young developing inflorescences (5mm)3.428943.805132.840092.65444
INF2Developing inflorescences (1-1.5 cm)3.287262.838363.194583.09033
ROORoots from the seedlings (10 cm shoot stage)0.2498610.6760860.598410.664687
NODDeveloping tillers at six leaf stage, 3rd internode0.01416350.009969040.009540580.0322715
CAR5Developing grain, bracts removed (5 DPA)0.763191.054810.7626640.768577
CAR15Developing grain, bracts removed (15 DPA)0.1643870.1933430.1677730.371815



CDS Structure of MLOC_26365






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26365.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376308NoneNoneNoneNone
MLOC_26365.1CUST_2066_PI427708080AvailableAvailablecontig_175148 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g29950.3 -3 8e-114 367 201/489 (41%) 13109.m02980 protein OsPOP19 - Putative Prolyl Oligopeptidase homologue, expressed
TAIR PP10 AT5G66960.1 -3 0.0 956 467/746 (63%) Prolyl oligopeptidase family protein | chr5:26736209-26739493 REVERSE LENGTH=792