MLOC_26335 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.72257.314838.406119.81323
LEAShoots from the seedlings (10 cm shoot stage)114.91325.574947.082152.42
INF1Young developing inflorescences (5mm)7.75037.860618.522997.66819
INF2Developing inflorescences (1-1.5 cm)11.08674.081447.311748.4617
ROORoots from the seedlings (10 cm shoot stage)9.072364.986724.685376.3929
NODDeveloping tillers at six leaf stage, 3rd internode57.9527125.0622.8949303.926
CAR5Developing grain, bracts removed (5 DPA)20.782622.559727.26725.051
CAR15Developing grain, bracts removed (15 DPA)0.3942770.20160.5657330.953838



CDS Structure of MLOC_26335






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26335.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26335.1CUST_3809_PI427708083AvailableAvailablecontig_174967 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g48200.1 -3 4e-120 350 161/178 (90%) 13106.m05124 protein glycosyl hydrolases family 16, putative, expressed
TAIR PP10 AT4G25810.1 -3 8e-84 256 117/173 (68%) | Symbols: XTR6, XTH23 | xyloglucan endotransglycosylase 6 | chr4:13128694-13129715 FORWARD LENGTH=286