- Predicted Gene MLOC_2630
- Gene IDMLOC_2630
- Source Contig contig_1234930
MLOC_2630 FPKM values
FPKM by Treatment | FPKM by Replicate |
---|---|
There are no FPKM-by-treatment values calculated for this gene. | ![]() |
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|---|---|---|---|---|
EMB | 4-day embryos dissected from germinating grains | 3.99167 | 5.21854 | 4.41476 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.21647 | 9.75763 | 10.7439 | 0 |
INF1 | Young developing inflorescences (5mm) | 7.75059 | 8.891 | 12.2038 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.0964 | 8.76062 | 7.48075 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.80626 | 7.63121 | 9.77112 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.22445 | 5.00404 | 9.78437 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.85727 | 8.12699 | 2.97845 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.24488 | 1.99431 | 4.98313 | 0 |
CDS Structure of MLOC_2630
![](/morexGenes/blast_net_images/MLOC_2630_assembly3_WGSMorex_rbca.fasta_genes.png)
Members of Gene Cluster
This cluster has a confidence assignment of High Confidence.The gene has a transcript that is part of a cluster represented by AK366111
Cluster member | Probe ID | FPKM by replicate | FPKM by treatment | Source Contig |
---|---|---|---|---|
AK366111 | CUST_21235_PI427708080 | None | None | None |
MLOC_10864.1 | None | Available | None | contig_155995 (Mapped) |
MLOC_25248.1 | None | Available | None | contig_1680006 (Not mapped) |
MLOC_2630.1 | None | Available | None | contig_1234930 (Not mapped) |
MLOC_28342.1 | None | Available | None | contig_190993 (Not mapped) |
MLOC_30676.1 | None | Available | None | contig_2117877 (Not mapped) |
MLOC_30856.1 | None | Available | None | contig_2133488 (Not mapped) |
MLOC_40829.1 | None | Available | None | contig_256529 (Mapped) |
MLOC_46423.1 | None | Available | None | contig_29007 (Not mapped) |
MLOC_49059.1 | None | Available | None | contig_33468 (Not mapped) |
MLOC_49267.1 | None | Available | None | contig_338798 (Mapped) |
MLOC_52892.1 | None | Available | None | contig_378873 (Not mapped) |
MLOC_54702.1 | None | Available | None | contig_393235 (Mapped) |
MLOC_70914.1 | None | Available | Available | contig_58773 (Mapped) |
MLOC_78399.1 | None | Available | None | contig_800647 (Not mapped) |
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Rice PP6 | None | - | - | - | - | - |
TAIR PP10 | None | - | - | - | - | - |