MLOC_26246 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4672631.184851.747450.753666
LEAShoots from the seedlings (10 cm shoot stage)0.456010.2489630.430130.257225
INF1Young developing inflorescences (5mm)1.861612.391251.042151.21355
INF2Developing inflorescences (1-1.5 cm)2.86672.34384.407012.70177
ROORoots from the seedlings (10 cm shoot stage)1.557991.889574.551891.71582
NODDeveloping tillers at six leaf stage, 3rd internode2.696411.561016.640525.41058
CAR5Developing grain, bracts removed (5 DPA)1.64951.404841.163811.11362
CAR15Developing grain, bracts removed (15 DPA)2.932742.34443.347755.11496



CDS Structure of MLOC_26246






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26246.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26246.1CUST_11860_PI427708083AvailableAvailablecontig_174376 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g16130.1 +1 3e-14 70 44/56 (79%) 13108.m01724 protein fiber protein Fb34, putative, expressed
TAIR PP10None-----