MLOC_26208 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.931964.218454.537564.52632
LEAShoots from the seedlings (10 cm shoot stage)1.980753.838453.63512.71077
INF1Young developing inflorescences (5mm)1.812052.119642.173451.88551
INF2Developing inflorescences (1-1.5 cm)1.292641.537381.590921.78564
ROORoots from the seedlings (10 cm shoot stage)3.775743.174573.85444.21304
NODDeveloping tillers at six leaf stage, 3rd internode2.825283.163513.024618.29771
CAR5Developing grain, bracts removed (5 DPA)1.950752.194652.213982.39871
CAR15Developing grain, bracts removed (15 DPA)1.020311.11210.8516242.6914



CDS Structure of MLOC_26208






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26208.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26208.2CUST_11858_PI427708083AvailableAvailablecontig_174203 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g06330.1 +2 3e-33 126 79/104 (76%) 13105.m00677 protein nifU, putative, expressed
TAIR PP10 AT3G20970.2 +2 3e-22 94 42/53 (79%) | Symbols: NFU4, ATNFU2 | NFU domain protein 4 | chr3:7348277-7349627 FORWARD LENGTH=222