MLOC_2619 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.122193 | 0.142051 | 0.0516012 | 0.135663 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0303603 | 0 | 0 | 0.037214 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.19628 | 0.451855 | 0.385309 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.00518419 | 0 | 0.0488532 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.576471 | 0.629666 | 0.609496 | 0.628153 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.0353 | 16.3964 | 11.4366 | 37.2373 |
CDS Structure of MLOC_2619
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2619.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g04490.1 |
+2 |
5e-28 |
119 |
74/171 (43%) |
13102.m00470 protein histone acetyltransferase HAC1, putative, expressed |
| TAIR PP10 |
AT3G07200.2 |
+2 |
7e-15 |
74 |
33/72 (46%) |
RING/U-box superfamily protein | chr3:2291343-2292223 FORWARD LENGTH=182 |
