MLOC_26153 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.3570810.2642770.345416
LEAShoots from the seedlings (10 cm shoot stage)0.6468340.8453860.553820.527108
INF1Young developing inflorescences (5mm)0.3544790.08949540.5482010.25879
INF2Developing inflorescences (1-1.5 cm)0.593490.06892970.0966720.286332
ROORoots from the seedlings (10 cm shoot stage)00.29345100.698352
NODDeveloping tillers at six leaf stage, 3rd internode0.3865250.1857620.05007590.504558
CAR5Developing grain, bracts removed (5 DPA)00.0814690.09819770.0764063
CAR15Developing grain, bracts removed (15 DPA)0.2754040.2866560.8109590.801339



CDS Structure of MLOC_26153






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26153.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26153.1NoneAvailableAvailablecontig_173894 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g17990.1 +3 2e-94 306 149/217 (69%) 13108.m01918 protein retrotransposon protein, putative, unclassified
TAIR PP10 AT4G23160.1 +3 2e-46 167 87/207 (42%) | Symbols: CRK8 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | chr4:12129485-12134086 FORWARD LENGTH=1262