MLOC_26035 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.06088730.1539510.3860220.271489
LEAShoots from the seedlings (10 cm shoot stage)0.5187850.09124820.2039830.229314
INF1Young developing inflorescences (5mm)0.3126820.6823610.5775150.598481
INF2Developing inflorescences (1-1.5 cm)0.1630410.07781910.0907420.149359
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.7207791.058023.481534.65159
CAR5Developing grain, bracts removed (5 DPA)00.1410550.04378130.148732
CAR15Developing grain, bracts removed (15 DPA)0.05900990.03570440.04251220.139924



CDS Structure of MLOC_26035






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26035.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26035.1NoneAvailableAvailablecontig_173064 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g28630.1 -1 1e-99 298 153/200 (77%) 13109.m02825 protein gibberellin receptor, putative, expressed
TAIR PP10 AT1G49640.1 -1 2e-41 147 78/201 (39%) alpha/beta-Hydrolases superfamily protein | chr1:18375697-18376644 REVERSE LENGTH=315