MLOC_26029 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.936354.194985.190893.18797
LEAShoots from the seedlings (10 cm shoot stage)6.205216.942798.939994.75105
INF1Young developing inflorescences (5mm)4.231335.18136.466093.08111
INF2Developing inflorescences (1-1.5 cm)3.773713.872854.661323.41738
ROORoots from the seedlings (10 cm shoot stage)5.460146.354665.5795.50722
NODDeveloping tillers at six leaf stage, 3rd internode10.90389.3381811.740725.7729
CAR5Developing grain, bracts removed (5 DPA)3.970844.158494.365643.04275
CAR15Developing grain, bracts removed (15 DPA)2.412873.2252.676574.4987



CDS Structure of MLOC_26029






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26029.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26029.3CUST_10341_PI427708080AvailableAvailablecontig_173029 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g45040.1 -3 1e-43 155 73/155 (47%) 13105.m04778 protein OsFBX170 - F-box domain containing protein, expressed
TAIR PP10None-----