MLOC_26014 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.1294720.1729270.160708
LEAShoots from the seedlings (10 cm shoot stage)0.40117500.2300170.273956
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.3696540.1165210.337476
ROORoots from the seedlings (10 cm shoot stage)0.275850.14998800.300839
NODDeveloping tillers at six leaf stage, 3rd internode0.1755960.04358140.06519980.138057
CAR5Developing grain, bracts removed (5 DPA)0.2458840.4577010.4874810.397828
CAR15Developing grain, bracts removed (15 DPA)0.1920810.1077210.139030.383653



CDS Structure of MLOC_26014






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_26014.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_26014.1CUST_3762_PI427708083AvailableAvailablecontig_172922 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g61680.1 -2 1e-32 117 72/105 (69%) 13101.m06573 protein expressed protein
TAIR PP10 AT4G08330.1 -2 5e-16 72 38/87 (44%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:5255384-5256525 REVERSE LENGTH=164