- Predicted Gene MLOC_25990
MLOC_25990 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.16107 | 0.0494016 | 0.0686735 | 0.088553 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.2424 | 0.0897045 | 0.0796253 | 1.56049 |
| INF1 | Young developing inflorescences (5mm) | 0.0845268 | 0 | 0 | 0.0781719 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.48298 | 1.80821 | 1.93051 | 2.24962 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 30.7105 | 8.10131 | 7.67768 | 14.7901 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.4032 | 0.123829 | 0.120798 | 0.476876 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.753558 | 1.78316 | 0.626197 | 1.3839 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 92.0865 | 103.932 | 80.2071 | 252.758 |
CDS Structure of MLOC_25990
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25990.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g04370.1 |
-2 |
5e-40 |
96 |
49/64 (77%) |
13101.m00396 protein hsp20/alpha crystallin family protein, putative, expressed |
| TAIR PP10 |
AT5G59720.1 |
-1 |
4e-32 |
81 |
50/65 (77%) |
| Symbols: HSP18.2 | heat shock protein 18.2 | chr5:24062632-24063117 FORWARD LENGTH=161 |