MLOC_2595 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.843212.97112.96989.51984
LEAShoots from the seedlings (10 cm shoot stage)12.7219.173710.03637.81192
INF1Young developing inflorescences (5mm)10.225712.798112.62357.48379
INF2Developing inflorescences (1-1.5 cm)8.349399.286399.043777.78762
ROORoots from the seedlings (10 cm shoot stage)7.2970610.06436.895199.13743
NODDeveloping tillers at six leaf stage, 3rd internode16.995113.94619.9551439.0107
CAR5Developing grain, bracts removed (5 DPA)7.221358.441268.019195.91976
CAR15Developing grain, bracts removed (15 DPA)2.609172.195252.666794.33323



CDS Structure of MLOC_2595






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2595.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2595.1CUST_11852_PI427708083AvailableAvailablecontig_123199 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g22864.2 -1 8e-63 220 111/124 (90%) 13108.m02337 protein sec8 exocyst complex component specific domain containing protein, expressed
TAIR PP10 AT3G10380.1 -1 2e-38 150 73/122 (60%) | Symbols: SEC8, ATSEC8 | subunit of exocyst complex 8 | chr3:3219922-3228356 REVERSE LENGTH=1053