MLOC_25941 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.229971.970333.713273.6907
LEAShoots from the seedlings (10 cm shoot stage)3.429560.9410781.797321.82807
INF1Young developing inflorescences (5mm)2.579674.4625410.89664.81886
INF2Developing inflorescences (1-1.5 cm)2.384752.923021.848062.77843
ROORoots from the seedlings (10 cm shoot stage)9.139931.405553.513943.13593
NODDeveloping tillers at six leaf stage, 3rd internode2.346575.846994.1179213.7745
CAR5Developing grain, bracts removed (5 DPA)6.452278.7706812.27299.15131
CAR15Developing grain, bracts removed (15 DPA)1.119220.7444751.960522.85357



CDS Structure of MLOC_25941






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25941.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25941.1CUST_3748_PI427708083AvailableAvailablecontig_1723496 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g03750.1 +2 1e-50 163 79/101 (78%) 13101.m00326 protein expressed protein
TAIR PP10 AT1G67080.1 +2 3e-39 133 60/98 (61%) | Symbols: ABA4 | abscisic acid (aba)-deficient 4 | chr1:25045405-25046681 REVERSE LENGTH=220