- Predicted Gene MLOC_25934
MLOC_25934 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.30097 | 7.5175 | 0 | 4.15241 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.53973 | 0 | 2.93888 | 3.31356 |
| INF1 | Young developing inflorescences (5mm) | 1.80876 | 3.72564 | 1.60157 | 1.29284 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.8344 | 1.97626 | 1.73843 | 1.98529 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.96911 | 4.00873 | 0 | 4.59686 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.89125 | 6.97528 | 6.06677 | 13.519 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.11163 | 2.51169 | 1.913 | 1.23465 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_25934
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25934.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g74330.1 |
-1 |
2e-18 |
80 |
36/38 (95%) |
13101.m08124 protein pectinacetylesterase domain containing protein, expressed |
| TAIR PP10 |
AT3G09405.1 |
-1 |
3e-12 |
62 |
27/38 (71%) |
Pectinacetylesterase family protein | chr3:2895009-2897366 REVERSE LENGTH=409 |