MLOC_25921 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.916712.888710.60250
LEAShoots from the seedlings (10 cm shoot stage)8.2223212.665818.39550
INF1Young developing inflorescences (5mm)1.004660.73480100
INF2Developing inflorescences (1-1.5 cm)3.29741.365283.73760
ROORoots from the seedlings (10 cm shoot stage)83.835335.835925.43030
NODDeveloping tillers at six leaf stage, 3rd internode15.30729.491724.18790
CAR5Developing grain, bracts removed (5 DPA)15.49916.591916.79020
CAR15Developing grain, bracts removed (15 DPA)4.248514.235293.786890



CDS Structure of MLOC_25921






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365200
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365200CUST_24875_PI427708080NoneNoneNone
MLOC_2454.1NoneAvailableNonecontig_1217746 (Not mapped)
MLOC_25048.1NoneAvailableNonecontig_16682 (Mapped)
MLOC_25921.2NoneAvailableNonecontig_1722065 (Not mapped)
MLOC_46704.1NoneAvailableNonecontig_294484 (Not mapped)
MLOC_62449.1NoneAvailableAvailablecontig_46584 (Not mapped)
MLOC_76140.1NoneAvailableNonecontig_702681 (Not mapped)
MLOC_79259.1NoneAvailableNonecontig_841611 (Not mapped)
MLOC_80552.1NoneAvailableNonecontig_912847 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----