MLOC_25919 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.11249600
LEAShoots from the seedlings (10 cm shoot stage)0.91444400.1990210
INF1Young developing inflorescences (5mm)0.09520860.31542800
INF2Developing inflorescences (1-1.5 cm)0.4484380.589140.2139660
ROORoots from the seedlings (10 cm shoot stage)00.39582100
NODDeveloping tillers at six leaf stage, 3rd internode00.1250410.08411640
CAR5Developing grain, bracts removed (5 DPA)0.1098380.1014280.3358950
CAR15Developing grain, bracts removed (15 DPA)0.4430780.1967990.77350



CDS Structure of MLOC_25919






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369875
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369875CUST_25387_PI427708080NoneNoneNone
MLOC_1648.1NoneAvailableNonecontig_1145962 (Not mapped)
MLOC_1974.1NoneAvailableAvailablecontig_117571 (Mapped)
MLOC_25022.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25024.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25919.1NoneAvailableNonecontig_1721789 (Mapped)
MLOC_29187.1NoneAvailableNonecontig_1983382 (Mapped)
MLOC_29861.1NoneAvailableNonecontig_2043605 (Not mapped)
MLOC_34779.1NoneAvailableNonecontig_2445668 (Not mapped)
MLOC_36273.1NoneAvailableNonecontig_2543495 (Not mapped)
MLOC_37299.1NoneAvailableNonecontig_2548130 (Mapped)
MLOC_42646.1NoneAvailableNonecontig_2655842 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----