- Predicted Gene MLOC_25908
MLOC_25908 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.212817 | 0.527495 | 0.530141 | 0.418049 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.4342 | 8.39432 | 5.18674 | 4.31623 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.0978526 | 0.120843 | 0.0825879 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0521931 | 0.0242313 | 0.287609 | 0.0937455 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.33057 | 1.63537 | 0.767052 | 1.65688 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0595738 | 0.0038313 | 0 | 0.0205238 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.515 | 1.95204 | 1.89233 | 1.54869 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.91365 | 8.42347 | 3.95229 | 17.444 |
CDS Structure of MLOC_25908
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25908.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g28410.1 |
-3 |
5e-94 |
301 |
146/219 (67%) |
13108.m02934 protein retinal pigment epithelial membrane protein, expressed |
| TAIR PP10 |
AT3G63520.1 |
-3 |
3e-20 |
95 |
65/216 (30%) |
| Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | carotenoid cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD LENGTH=538 |