MLOC_2590 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.54058 | 9.84744 | 10.0614 | 6.69013 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.48545 | 4.51716 | 3.36861 | 3.42985 |
| INF1 | Young developing inflorescences (5mm) | 10.995 | 10.3681 | 10.0783 | 6.66434 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.68165 | 8.99559 | 8.128 | 7.18753 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.11777 | 3.52536 | 5.32284 | 3.04107 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.79021 | 2.9909 | 6.04909 | 9.28136 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.15509 | 9.04815 | 8.38059 | 6.69092 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.70414 | 2.49344 | 2.0255 | 3.54953 |
CDS Structure of MLOC_2590
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2590.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g27770.1 |
+3 |
5e-31 |
120 |
55/76 (72%) |
13103.m03247 protein heme oxygenase 2, putative, expressed |
| TAIR PP10 |
AT2G26550.2 |
+3 |
6e-25 |
102 |
47/78 (60%) |
| Symbols: HO2 | heme oxygenase 2 | chr2:11291584-11293426 REVERSE LENGTH=299 |
