MLOC_25886 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.39414.806913.983814.5772
LEAShoots from the seedlings (10 cm shoot stage)9.201023.423563.891394.6912
INF1Young developing inflorescences (5mm)47.563658.899154.865846.2124
INF2Developing inflorescences (1-1.5 cm)39.45853.592139.077650.4144
ROORoots from the seedlings (10 cm shoot stage)9.6260113.85159.8111115.2108
NODDeveloping tillers at six leaf stage, 3rd internode3.776924.979154.31115.6651
CAR5Developing grain, bracts removed (5 DPA)22.8723.600524.773823.4821
CAR15Developing grain, bracts removed (15 DPA)5.623894.965484.5879912.172



CDS Structure of MLOC_25886






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25886.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370692NoneNoneNoneNone
MLOC_25886.1CUST_2061_PI427708080AvailableAvailablecontig_171981 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g53560.1 +2 0.0 594 325/454 (72%) 13101.m05609 protein phosphoesterase, putative, expressed
TAIR PP10 AT3G14890.2 +2 2e-117 372 195/364 (54%) phosphoesterase | chr3:5008751-5013060 FORWARD LENGTH=684