MLOC_25869 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.540283.225413.702484.79169
LEAShoots from the seedlings (10 cm shoot stage)0.12336000.0554228
INF1Young developing inflorescences (5mm)0.0377774000.0156694
INF2Developing inflorescences (1-1.5 cm)0.0411259000.0255789
ROORoots from the seedlings (10 cm shoot stage)3.706461.617023.257512.51649
NODDeveloping tillers at six leaf stage, 3rd internode00.054039600.140401
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_25869






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25869.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25869.1CUST_3742_PI427708083AvailableAvailablecontig_171859 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g46830.1 -1 6e-115 342 181/219 (83%) 13107.m04960 protein sex determination protein tasselseed-2, putative, expressed
TAIR PP10 AT3G26770.1 -1 2e-64 211 112/215 (52%) NAD(P)-binding Rossmann-fold superfamily protein | chr3:9845494-9847079 FORWARD LENGTH=306